Last updated on 2024-05-14 15:49:16 CEST.
Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
---|---|---|---|---|---|---|
r-devel-linux-x86_64-debian-clang | 2.2.0 | 59.06 | 719.32 | 778.38 | OK | |
r-devel-linux-x86_64-debian-gcc | 2.2.0 | 52.58 | 527.29 | 579.87 | OK | |
r-devel-linux-x86_64-fedora-clang | 2.2.0 | OK | ||||
r-devel-linux-x86_64-fedora-gcc | 2.2.0 | 946.50 | OK | |||
r-devel-windows-x86_64 | 2.2.0 | 45.00 | 492.00 | 537.00 | OK | |
r-patched-linux-x86_64 | 2.1.0 | 60.80 | 691.36 | 752.16 | ERROR | |
r-release-linux-x86_64 | 2.2.0 | 41.54 | 675.16 | 716.70 | OK | |
r-release-macos-arm64 | 2.2.0 | 282.00 | OK | |||
r-release-macos-x86_64 | 2.2.0 | 497.00 | NOTE | |||
r-release-windows-x86_64 | 2.2.0 | 51.00 | 540.00 | 591.00 | OK | |
r-oldrel-macos-arm64 | 2.2.0 | 270.00 | NOTE | |||
r-oldrel-macos-x86_64 | 2.2.0 | 489.00 | NOTE | |||
r-oldrel-windows-x86_64 | 2.2.0 | 44.00 | 509.00 | 553.00 | NOTE |
Version: 2.1.0
Check: examples
Result: ERROR
Running examples in ‘dowser-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: maskCodons
> ### Title: 'maskCodons' Masks codons split by insertions
> ### Aliases: maskCodons
>
> ### ** Examples
>
> s = "ATCATCATC..."
> q = "ATCTTTATCATC"
> print(maskCodons(1,q,s,TRUE))
Error in .load_package_gracefully("pwalign", "starting with BioC 3.19, ", :
Could not load package pwalign. Is it installed?
Note that starting with BioC 3.19, calling pairwiseAlignment() requires
the pwalign package. Please install it with:
BiocManager::install("pwalign")
Calls: print ... <Anonymous> -> .call_fun_in_pwalign -> .load_package_gracefully
Execution halted
Flavor: r-patched-linux-x86_64
Version: 2.2.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘pwalign’
Flavors: r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64