CRAN Package Check Results for Package ridigbio

Last updated on 2024-09-27 03:49:55 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.4.0 2.99 324.98 327.97 ERROR
r-devel-linux-x86_64-debian-gcc 0.4.0 2.15 211.66 213.81 ERROR
r-devel-linux-x86_64-fedora-clang 0.4.0 515.60 OK
r-devel-linux-x86_64-fedora-gcc 0.4.0 550.02 ERROR
r-devel-windows-x86_64 0.4.0 5.00 285.00 290.00 ERROR
r-patched-linux-x86_64 0.4.0 2.50 320.47 322.97 ERROR
r-release-linux-x86_64 0.4.0 2.43 318.51 320.94 ERROR
r-release-macos-arm64 0.4.0 143.00 OK
r-release-macos-x86_64 0.4.0 466.00 OK
r-release-windows-x86_64 0.4.0 5.00 283.00 288.00 ERROR
r-oldrel-macos-arm64 0.4.0 149.00 OK
r-oldrel-macos-x86_64 0.4.0 473.00 OK
r-oldrel-windows-x86_64 0.4.0 6.00 234.00 240.00 ERROR

Check Details

Version: 0.4.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘BadCoordinateID.Rmd’ using rmarkdown --- finished re-building ‘BadCoordinateID.Rmd’ --- re-building ‘BasicUsage.Rmd’ using rmarkdown --- finished re-building ‘BasicUsage.Rmd’ --- re-building ‘Fields.Rmd’ using rmarkdown Quitting from lines 76-99 [unnamed-chunk-4] (Fields.Rmd) Error: processing vignette 'Fields.Rmd' failed with diagnostics: replacement has length zero --- failed re-building ‘Fields.Rmd’ --- re-building ‘FindTissue.Rmd’ using rmarkdown [WARNING] Div at FindTissue.knit.md line 175 column 1 unclosed at FindTissue.knit.md line 8648 column 1, closing implicitly. --- finished re-building ‘FindTissue.Rmd’ --- re-building ‘IDDataFlags.Rmd’ using rmarkdown --- finished re-building ‘IDDataFlags.Rmd’ --- re-building ‘MediaAPIDemo.Rmd’ using rmarkdown Warning in get_engine(options$engine) : Unknown language engine 'undefined' (must be registered via knit_engines$set()). --- finished re-building ‘MediaAPIDemo.Rmd’ --- re-building ‘ModifiedDataID.Rmd’ using rmarkdown --- finished re-building ‘ModifiedDataID.Rmd’ --- re-building ‘RecordAPIDemo.Rmd’ using rmarkdown [WARNING] Div at RecordAPIDemo.knit.md line 200 column 1 unclosed at RecordAPIDemo.knit.md line 11795 column 1, closing implicitly. --- finished re-building ‘RecordAPIDemo.Rmd’ --- re-building ‘ridigbio.Rmd’ using rmarkdown --- finished re-building ‘ridigbio.Rmd’ SUMMARY: processing the following file failed: ‘Fields.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.4.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘BadCoordinateID.Rmd’ using rmarkdown --- finished re-building ‘BadCoordinateID.Rmd’ --- re-building ‘BasicUsage.Rmd’ using rmarkdown --- finished re-building ‘BasicUsage.Rmd’ --- re-building ‘Fields.Rmd’ using rmarkdown Quitting from lines 76-99 [unnamed-chunk-4] (Fields.Rmd) Error: processing vignette 'Fields.Rmd' failed with diagnostics: replacement has length zero --- failed re-building ‘Fields.Rmd’ --- re-building ‘FindTissue.Rmd’ using rmarkdown [WARNING] Div at FindTissue.knit.md line 175 column 1 unclosed at FindTissue.knit.md line 8628 column 1, closing implicitly. --- finished re-building ‘FindTissue.Rmd’ --- re-building ‘IDDataFlags.Rmd’ using rmarkdown --- finished re-building ‘IDDataFlags.Rmd’ --- re-building ‘MediaAPIDemo.Rmd’ using rmarkdown Warning in get_engine(options$engine) : Unknown language engine 'undefined' (must be registered via knit_engines$set()). --- finished re-building ‘MediaAPIDemo.Rmd’ --- re-building ‘ModifiedDataID.Rmd’ using rmarkdown --- finished re-building ‘ModifiedDataID.Rmd’ --- re-building ‘RecordAPIDemo.Rmd’ using rmarkdown [WARNING] Div at RecordAPIDemo.knit.md line 200 column 1 unclosed at RecordAPIDemo.knit.md line 11795 column 1, closing implicitly. --- finished re-building ‘RecordAPIDemo.Rmd’ --- re-building ‘ridigbio.Rmd’ using rmarkdown --- finished re-building ‘ridigbio.Rmd’ SUMMARY: processing the following file failed: ‘Fields.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.4.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'BadCoordinateID.Rmd' using rmarkdown --- finished re-building 'BadCoordinateID.Rmd' --- re-building 'BasicUsage.Rmd' using rmarkdown --- finished re-building 'BasicUsage.Rmd' --- re-building 'Fields.Rmd' using rmarkdown Quitting from lines 76-99 [unnamed-chunk-4] (Fields.Rmd) Error: processing vignette 'Fields.Rmd' failed with diagnostics: replacement has length zero --- failed re-building 'Fields.Rmd' --- re-building 'FindTissue.Rmd' using rmarkdown --- finished re-building 'FindTissue.Rmd' --- re-building 'IDDataFlags.Rmd' using rmarkdown --- finished re-building 'IDDataFlags.Rmd' --- re-building 'MediaAPIDemo.Rmd' using rmarkdown Warning in get_engine(options$engine) : Unknown language engine 'undefined' (must be registered via knit_engines$set()). --- finished re-building 'MediaAPIDemo.Rmd' --- re-building 'ModifiedDataID.Rmd' using rmarkdown --- finished re-building 'ModifiedDataID.Rmd' --- re-building 'RecordAPIDemo.Rmd' using rmarkdown --- finished re-building 'RecordAPIDemo.Rmd' --- re-building 'ridigbio.Rmd' using rmarkdown --- finished re-building 'ridigbio.Rmd' SUMMARY: processing the following file failed: 'Fields.Rmd' Error: Vignette re-building failed. Execution halted Flavors: r-devel-windows-x86_64, r-release-windows-x86_64

Version: 0.4.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'BadCoordinateID.Rmd' using rmarkdown --- finished re-building 'BadCoordinateID.Rmd' --- re-building 'BasicUsage.Rmd' using rmarkdown --- finished re-building 'BasicUsage.Rmd' --- re-building 'Fields.Rmd' using rmarkdown Quitting from lines 76-99 [unnamed-chunk-4] (Fields.Rmd) Error: processing vignette 'Fields.Rmd' failed with diagnostics: replacement has length zero --- failed re-building 'Fields.Rmd' --- re-building 'FindTissue.Rmd' using rmarkdown --- finished re-building 'FindTissue.Rmd' --- re-building 'IDDataFlags.Rmd' using rmarkdown --- finished re-building 'IDDataFlags.Rmd' --- re-building 'MediaAPIDemo.Rmd' using rmarkdown Warning in get_engine(options$engine) : Unknown language engine 'undefined' (must be registered via knit_engines$set()). --- finished re-building 'MediaAPIDemo.Rmd' --- re-building 'ModifiedDataID.Rmd' using rmarkdown --- finished re-building 'ModifiedDataID.Rmd' --- re-building 'RecordAPIDemo.Rmd' using rmarkdown Quitting from lines 130-144 [unnamed-chunk-5] (RecordAPIDemo.Rmd) Error: processing vignette 'RecordAPIDemo.Rmd' failed with diagnostics: HTTP failure: 500 Error message from API server: {"error":"Internal Server Error"} --- failed re-building 'RecordAPIDemo.Rmd' --- re-building 'ridigbio.Rmd' using rmarkdown --- finished re-building 'ridigbio.Rmd' SUMMARY: processing the following files failed: 'Fields.Rmd' 'RecordAPIDemo.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-oldrel-windows-x86_64